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Intron Name: Anas_platyrhynchos_platyrhynchos_1_61436204_61438843_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61436204 - 61438843

Intron Length:

2640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGGTGTCGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TTTCTCTCATCT

Flanking Amino Acid:

SDLIHRFEGGSPFSPSDLKK

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

77.9

36.9

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

66.8

0.38

61.1

40.1

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

58.8

0.35

1.8

81.56

39.8

Associated Gene:

Gene:

FGD4

Ensembl Gene ID:

ENSAPLG00000011676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034165

61408749 - 61503150

94402

ENSAPLT00000027324

61408749 - 61520984

112236

ENSAPLT00000012228

61408749 - 61461992

53244

ENSAPLT00000048075

61408749 - 61472192

63444