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Intron Name: Anas_platyrhynchos_platyrhynchos_1_61749065_61749966_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61749065 - 61749966

Intron Length:

902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

AAATTCTTAATT

Flanking Amino Acid:

SLASEKTTVAGVKSKKEDWL

Intron Amino Acid Position:

1824

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

73.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

85.9

0.81

0.7

81.1

30.2

Minor 5ss

37.1

-1.5

3.3

50.2

46.4

Minor BPS

74.8

0.86

1.1

80.28

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036173

61725661 - 61755476

29816

ENSAPLT00000020850

61748497 - 61761401

12905