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Intron Name: Anas_platyrhynchos_platyrhynchos_1_61755477_61756327_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

61755477 - 61756327

Intron Length:

851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACATAC

5'SS Class:

major

3'SS Sequence:

GTTTTGTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

AGGAGATTAAGG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

72.1

34.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

0.74

0.8

81.2

36.5

Minor 5ss

43.8

-0.7

2.9

45.7

Minor BPS

39.6

-0.9

2.2

40.41

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020850

61748497 - 61761401

12905

ENSAPLT00000006809

61748497 - 61756492

7996