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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62007220_62008998_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62007220 - 62008998

Intron Length:

1779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TTGTGTGTATGT

Flanking Amino Acid:

RYEKDFQNCFGLHEARSGDI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.9

41.1

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

36.1

-1.6

3.2

43.6

Minor BPS

39.5

-0.7

2.6

62.51

48.1

Associated Gene:

Gene:

SINHCAF

Ensembl Gene ID:

ENSAPLG00000006692

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006942

62007092 - 62012459

5368