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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62047894_62048016_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

62047894 - 62048016

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAAGTCA

5'SS Class:

weak_major

3'SS Sequence:

GGAAACTCGAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAAAGAA

U12 Branch Point Sequence:

GGAACCAGAGCA

Flanking Amino Acid:

EEPEQKKTEPAWETQLQNPP

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.1

0.12

1.1

34.9

Major BPS

46.7

-0.2

0.9

39.1

Major PPT

41.7

-0.4

1.7

35.1

40.8

Minor 5ss

33.8

-1.8

3.4

47.6

Minor BPS

41.9

-0.6

1.9

49.59

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007003

62029733 - 62069253

39521