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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62064278_62069136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62064278 - 62069136

Intron Length:

4859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTGTATTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

ATTTTACTAATA

Flanking Amino Acid:

DYAGMQYSQRDVNYQQCYKR

Intron Amino Acid Position:

865

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

87.1

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

0.65

0.8

77.1

36.8

Minor 5ss

38.9

-1.3

2.8

43.1

43.9

Minor BPS

54.2

0.13

1.9

71.45

34.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007003

62029733 - 62069253

39521