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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62098584_62099401_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62098584 - 62099401

Intron Length:

818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTAATATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

ACTCCTCTAATA

Flanking Amino Acid:

TWKQMKPHIQSITEEVIFSL

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

65.3

0.34

0.9

35.6

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

54.1

0.12

1.6

63.7

36.8

Associated Gene:

Gene:

IPO8

Ensembl Gene ID:

ENSAPLG00000009843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018215

62085759 - 62124348

38590

ENSAPLT00000010311

62085142 - 62124453

39312

ENSAPLT00000030932

62085142 - 62124453

39312

ENSAPLT00000026070

62092781 - 62124453

31673

ENSAPLT00000019674

62085142 - 62124453

39312