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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62101237_62102097_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62101237 - 62102097

Intron Length:

861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

ACCTCACTGACA

Flanking Amino Acid:

LYTAAKKRKEVLPKMMAYCY

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.7

40.1

Major BPS

63.6

0.34

65.3

32.1

Major PPT

76.5

0.6

0.9

73.4

37.1

Minor 5ss

37.1

-1.5

3.3

49.6

Minor BPS

47.6

-0.1

1.9

58.65

40.8

Associated Gene:

Gene:

IPO8

Ensembl Gene ID:

ENSAPLG00000009843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019674

62085142 - 62124453

39312

ENSAPLT00000018215

62085759 - 62124348

38590

ENSAPLT00000010311

62085142 - 62124453

39312

ENSAPLT00000030932

62085142 - 62124453

39312

ENSAPLT00000026070

62092781 - 62124453

31673