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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62121212_62122673_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62121212 - 62122673

Intron Length:

1462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAATCT

5'SS Class:

major

3'SS Sequence:

AATGCTTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTACAAAACA

Flanking Amino Acid:

KDDKHVAEDNEEIPSDEEET

Intron Amino Acid Position:

906

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

70.2

34.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

76.9

0.6

0.9

69.9

40.5

Minor 5ss

40.1

-1.1

3.2

54.1

44.1

Minor BPS

55.4

0.17

2.1

77.56

38.9

Associated Gene:

Gene:

IPO8

Ensembl Gene ID:

ENSAPLG00000009843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030932

62085142 - 62124453

39312

ENSAPLT00000018215

62085759 - 62124348

38590