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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62123661_62124319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62123661 - 62124319

Intron Length:

659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTGCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

ATGGTATTATCT

Flanking Amino Acid:

TLAEHRRNAAAIFHIFSLL*

Intron Amino Acid Position:

1023

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.6

1.05

0.7

81.4

32.7

Major BPS

0.42

1.3

60.1

46.3

Major PPT

67.6

0.4

1.2

68.2

42.6

Minor 5ss

34.5

-1.8

2.9

43.8

43.9

Minor BPS

47.8

-0

1.9

66.76

44.1

Associated Gene:

Gene:

IPO8

Ensembl Gene ID:

ENSAPLG00000009843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018215

62085759 - 62124348

38590