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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62166282_62182259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62166282 - 62182259

Intron Length:

15978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGGCG

5'SS Class:

major

3'SS Sequence:

CTTTTCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTTAT

U12 Branch Point Sequence:

TTTTCTTTACAG

Flanking Amino Acid:

SYRPLCVLSFKLNILLAGMN

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

64.4

39.1

Major BPS

64.7

0.37

1.2

55.4

41.7

Major PPT

92.4

0.95

0.6

87.4

23.1

Minor 5ss

31.2

-2.1

3.5

39.2

40.5

Minor BPS

63.6

0.29

1.8

72.3

40.7

Associated Gene:

Gene:

TMTC1

Ensembl Gene ID:

ENSAPLG00000005055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025033

62165643 - 62326173

160531

ENSAPLT00000005235

62165643 - 62326173

160531