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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62182438_62184154_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62182438 - 62184154

Intron Length:

1717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

CTTTTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TCTGCTTTTACA

Flanking Amino Acid:

FAVHPIHTEAVTGIVGRADV

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

89.3

0.88

0.6

88.7

20.6

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

60.6

0.33

1.8

70.62

41.9

Associated Gene:

Gene:

TMTC1

Ensembl Gene ID:

ENSAPLG00000005055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025033

62165643 - 62326173

160531

ENSAPLT00000005235

62165643 - 62326173

160531