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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62184229_62185170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62184229 - 62185170

Intron Length:

942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGATC

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TGTTTGTCAAAT

Flanking Amino Acid:

LFLLAFLSYNRSVDQLYVGE

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

78.6

35.4

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

86.7

0.82

0.7

84.6

29.5

Minor 5ss

42.9

-0.8

3.1

59.7

45.1

Minor BPS

48.4

-0

2.3

74.04

42.5

Associated Gene:

Gene:

TMTC1

Ensembl Gene ID:

ENSAPLG00000005055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025033

62165643 - 62326173

160531

ENSAPLT00000005235

62165643 - 62326173

160531