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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62185348_62187124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62185348 - 62187124

Intron Length:

1777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

GTCGCCTGATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

GTCGCCTGATCA

Flanking Amino Acid:

FFSLSCNALKLRNGGIHQRP

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

80.4

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

60.7

0.24

1.1

58.6

41.9

Minor 5ss

40.3

-1.1

2.9

61.3

Minor BPS

49.1

-0

1.9

60.84

44.9

Associated Gene:

Gene:

TMTC1

Ensembl Gene ID:

ENSAPLG00000005055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025033

62165643 - 62326173

160531

ENSAPLT00000005235

62165643 - 62326173

160531