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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62187332_62237287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62187332 - 62237287

Intron Length:

49956

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGATG

5'SS Class:

major

3'SS Sequence:

CCTTATGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

TATTTCAAAACT

Flanking Amino Acid:

VPSKAIWAIRSYLTANNNQN

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

66.4

44.6

Major BPS

0.79

0.8

83.7

25.7

Major PPT

79.5

0.66

0.9

76.2

37.5

Minor 5ss

34.9

-1.7

3.4

48.5

47.3

Minor BPS

59.1

0.36

1.9

81.79

39.5

Associated Gene:

Gene:

TMTC1

Ensembl Gene ID:

ENSAPLG00000005055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025033

62165643 - 62326173

160531

ENSAPLT00000005235

62165643 - 62326173

160531