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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62237370_62238682_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62237370 - 62238682

Intron Length:

1313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TCTTCTTTGAAG

Flanking Amino Acid:

LKRAALVISYVILVLYFRLW

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

83.8

34.5

Major BPS

76.8

0.67

0.9

75.9

Major PPT

80.6

0.69

82.7

26.3

Minor 5ss

41.8

-0.9

2.8

56.1

41.3

Minor BPS

64.6

0.32

1.5

67.24

40.8

Associated Gene:

Gene:

TMTC1

Ensembl Gene ID:

ENSAPLG00000005055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025033

62165643 - 62326173

160531

ENSAPLT00000005235

62165643 - 62326173

160531