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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62251098_62265258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62251098 - 62265258

Intron Length:

14161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACGG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATTTGTTTAATT

Flanking Amino Acid:

LSLHCIAAFKKLEHKEVLVG

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.9

66.4

45.1

Major BPS

81.8

0.79

1.1

34.5

Major PPT

80.2

0.68

0.9

74.1

40.3

Minor 5ss

31.4

-2.1

39.3

45.9

Minor BPS

70.3

0.72

1.7

85.82

34.8

Associated Gene:

Gene:

TMTC1

Ensembl Gene ID:

ENSAPLG00000005055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025033

62165643 - 62326173

160531

ENSAPLT00000005235

62165643 - 62326173

160531