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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6225935_6227877_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6225935 - 6227877

Intron Length:

1943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTTGTTTTGAAG

Flanking Amino Acid:

KYSLPAMKLRDIWNFRARLV

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.4

43.3

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

77.4

0.62

78.6

33.6

Minor 5ss

36.2

-1.6

3.5

48.3

47.3

Minor BPS

53.4

-0

1.6

62.4

40.1

Associated Gene:

Gene:

PHYH

Ensembl Gene ID:

ENSAPLG00000004121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004238

6224945 - 6234255

9311