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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6231416_6231502_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6231416 - 6231502

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

TAACAAAGTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

ATGTAGTTAACA

Flanking Amino Acid:

KEFIRICRKEDFQEDEELFR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.2

39.5

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

56.6

0.15

1.1

48.5

43.2

Minor 5ss

-1.5

3.2

50.1

46.5

Minor BPS

0.15

2.2

70.74

41.3

Associated Gene:

Gene:

PHYH

Ensembl Gene ID:

ENSAPLG00000004121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004238

6224945 - 6234255

9311