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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62319558_62322561_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62319558 - 62322561

Intron Length:

3004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAC

U12 Branch Point Sequence:

ACCGGTTTAACA

Flanking Amino Acid:

NNYGVFLVDTGAPERAVSHY

Intron Amino Acid Position:

690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

76.2

33.5

Major BPS

71.9

0.54

1.2

75.6

36.6

Major PPT

86.2

0.81

0.8

77.9

36.6

Minor 5ss

33.5

-1.9

3.2

44.3

43.6

Minor BPS

49.2

-0

1.9

56.43

43.6

Associated Gene:

Gene:

TMTC1

Ensembl Gene ID:

ENSAPLG00000005055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005235

62165643 - 62326173

160531

ENSAPLT00000025033

62165643 - 62326173

160531