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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62323716_62324126_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62323716 - 62324126

Intron Length:

411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTGG

5'SS Class:

major

3'SS Sequence:

TGCTTTTTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATACAAT

U12 Branch Point Sequence:

GATACAATGACC

Flanking Amino Acid:

IFSKQEHYAKALEAIDKALQ

Intron Amino Acid Position:

830

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.1

54.3

45.2

Major BPS

56.4

0.16

1.3

65.1

38.1

Major PPT

83.9

0.76

0.8

79.8

32.1

Minor 5ss

35.1

-1.7

3.4

47.5

47.9

Minor BPS

46.8

-0.2

1.9

59.2

38.9

Associated Gene:

Gene:

TMTC1

Ensembl Gene ID:

ENSAPLG00000005055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025033

62165643 - 62326173

160531

ENSAPLT00000005235

62165643 - 62326173

160531