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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62324250_62325201_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62324250 - 62325201

Intron Length:

952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGACTG

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTATGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTT

Flanking Amino Acid:

EQNRLDEAFESYKRAVELNP

Intron Amino Acid Position:

871

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

68.1

42.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.2

0.7

0.9

78.1

35.3

Minor 5ss

41.7

-0.9

3.1

48.1

Minor BPS

65.4

0.56

1.5

80.16

36.3

Associated Gene:

Gene:

TMTC1

Ensembl Gene ID:

ENSAPLG00000005055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025033

62165643 - 62326173

160531

ENSAPLT00000005235

62165643 - 62326173

160531