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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62325280_62326031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62325280 - 62326031

Intron Length:

752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGACAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TCTCACTCATTT

Flanking Amino Acid:

MNMGGIEHIKGNYITARAYY

Intron Amino Acid Position:

897

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

69.6

36.5

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

0.81

0.7

81.9

29.3

Minor 5ss

37.4

-1.4

47.2

48.2

Minor BPS

46.8

-0.1

1.9

66.75

Associated Gene:

Gene:

TMTC1

Ensembl Gene ID:

ENSAPLG00000005055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025033

62165643 - 62326173

160531

ENSAPLT00000005235

62165643 - 62326173

160531