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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6232531_6233512_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

6232531 - 6233512

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ATTTGCACCCCAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CATTCCTTAATT

Flanking Amino Acid:

SPRLGTAPALTSVPTSAHVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.2

57.1

42.4

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

69.9

0.45

0.9

Minor 5ss

98.8

1.64

0.5

12.5

Minor BPS

83.9

1.14

89.11

35.7

Associated Gene:

Gene:

PHYH

Ensembl Gene ID:

ENSAPLG00000004121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004238

6224945 - 6234255

9311