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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62342558_62346101_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

62342558 - 62346101

Intron Length:

3544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTTTGCTTC

5'SS Class:

weak_minor

3'SS Sequence:

GCAGCTGTTCAAG|C

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

CCCCCTGTGACT

Flanking Amino Acid:

PSYSLALYQDRISGAEEACP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.3

39.7

Major BPS

0.22

1.2

52.4

43.3

Major PPT

52.9

0.07

1.2

48.2

43.9

Minor 5ss

61.5

0.39

2.2

73.5

35.9

Minor BPS

46.2

-0.2

59.52

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041272

62342477 - 62348841

6365