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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62347826_62348652_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62347826 - 62348652

Intron Length:

827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGGTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGAGAA

U12 Branch Point Sequence:

ACTGCAAGATCC

Flanking Amino Acid:

VSVGGQDPCQGGSGGPLVCR

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

48.4

-0.1

1.1

44.5

38.7

Major PPT

0.52

0.9

65.1

41.2

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

38.1

-0.9

47.87

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022253

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019100

62346135 - 62352237

6103

ENSAPLT00000041721

62341699 - 62348841

7143

ENSAPLT00000041272

62342477 - 62348841

6365

ENSAPLT00000035372

62345652 - 62348841

3190

ENSAPLT00000028982

62343071 - 62352487

9417