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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62365185_62366265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62365185 - 62366265

Intron Length:

1081

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTGCATTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAA

U12 Branch Point Sequence:

TCAACCTGACAC

Flanking Amino Acid:

AGWGERGAGGEEEQGSRLQQ

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

67.8

0.44

1.1

69.6

37.5

Major PPT

81.5

0.71

0.9

73.1

41.8

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

45.9

-0.3

1.8

54.41

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048538

62362571 - 62377644

15074

ENSAPLT00000031505

62359131 - 62366796

7666

ENSAPLT00000031260

62359131 - 62366796

7666