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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62399831_62401758_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

62399831 - 62401758

Intron Length:

1928

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGATGGAT

5'SS Class:

major

3'SS Sequence:

GCTCGCTTCAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TGTGTGAGAAAT

Flanking Amino Acid:

VKKCYNRRYHGSEEDETKRL

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.1

61.9

38.4

Major BPS

71.2

0.53

70.3

31.9

Major PPT

49.7

-0

1.7

56.2

38.9

Minor 5ss

25.1

-2.9

3.4

43.6

Minor BPS

38.7

-0.7

2.3

59.48

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004138

62398926 - 62404537

5612