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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62419877_62420012_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

62419877 - 62420012

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGCTGC

5'SS Class:

major

3'SS Sequence:

CCTGAGTGACAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTCTTTGTCATT

Flanking Amino Acid:

SLLLFNTTENLHQERLVSCV

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.7

0.3

1.1

53.5

40.6

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

47.6

-0.1

1.2

41.2

41.9

Minor 5ss

41.7

-0.9

3.1

59.8

Minor BPS

46.1

-0.2

2.3

69.97

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033584

62419717 - 62442616

22900