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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62473136_62473220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62473136 - 62473220

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

GCTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TCCCCCCTGACC

Flanking Amino Acid:

IGKGILGRRPEGRCPWPARA

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

62.1

38.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

85.2

0.79

0.8

76.9

37.3

Minor 5ss

27.9

-2.5

27.6

37.5

Minor BPS

54.7

0.13

1.7

64.2

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032059

62472632 - 62473581

950