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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62473136_62514986_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62473136 - 62514986

Intron Length:

41851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

GTTTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

TTTTTCTTACAG

Flanking Amino Acid:

IGKGILGRRPENETVLHQFC

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

62.1

38.7

Major BPS

64.5

0.36

65.2

28.2

Major PPT

89.7

0.89

0.7

84.2

30.9

Minor 5ss

27.9

-2.5

27.6

37.5

Minor BPS

63.2

0.28

1.8

72.05

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030518

62472632 - 62522074

49443