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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62534413_62540615_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

62534413 - 62540615

Intron Length:

6203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAGG

5'SS Class:

major

3'SS Sequence:

GTGTGTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

ACTAACAAAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

57.8

46.6

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

77.5

0.62

73.5

41.8

Minor 5ss

29.9

-2.3

3.3

39.8

45.8

Minor BPS

40.3

-0.7

50.02

40.3

Associated Gene:

Gene:

IQSEC3

Ensembl Gene ID:

ENSAPLG00000015024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015655

62533794 - 62568296

34503