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Intron Name: Anas_platyrhynchos_platyrhynchos_1_6253670_6253828_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6253670 - 6253828

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTATGGAAC

5'SS Class:

major

3'SS Sequence:

ACAAACAGCCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACACAA

U12 Branch Point Sequence:

TTTGTCTGAACG

Flanking Amino Acid:

THSDFFFFLFQG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.1

60.4

Major BPS

60.7

0.27

67.2

29.6

Major PPT

49.1

-0

36.4

39.3

Minor 5ss

41.2

-1

3.1

56.9

42.2

Minor BPS

64.9

0.33

1.6

71.74

41.2

Associated Gene:

Gene:

SEPHS1

Ensembl Gene ID:

ENSAPLG00000003830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003948

6242512 - 6253835

11324