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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62556507_62557151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62556507 - 62557151

Intron Length:

645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTGCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TCCATGTTAAGT

Flanking Amino Acid:

QKVERLIEAFSQRYCMCNPD

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

70.4

0.46

0.8

64.4

30.9

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

45.8

-0.2

2.3

63.22

47.2

Associated Gene:

Gene:

IQSEC3

Ensembl Gene ID:

ENSAPLG00000015024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015655

62533794 - 62568296

34503