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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62557319_62559297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62557319 - 62559297

Intron Length:

1979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCAACAT

U12 Branch Point Sequence:

TTCTGCCCAACA

Flanking Amino Acid:

MLEDFIRNLRGVDDGADIPR

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.8

78.5

28.9

Major BPS

48.4

-0.1

1.2

54.9

39.1

Major PPT

84.9

0.78

0.8

79.6

32.4

Minor 5ss

29.5

-2.3

3.4

40.8

45.7

Minor BPS

48.1

-0.1

2.3

68.3

43.9

Associated Gene:

Gene:

IQSEC3

Ensembl Gene ID:

ENSAPLG00000015024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015655

62533794 - 62568296

34503