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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62559438_62560265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62559438 - 62560265

Intron Length:

828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGCACC

5'SS Class:

major

3'SS Sequence:

GGATCTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAC

U12 Branch Point Sequence:

CCTCCTATAACC

Flanking Amino Acid:

VEKSIVGMKTVLSVPHRRLV

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

59.9

39.3

Major BPS

65.6

0.39

1.1

67.7

34.6

Major PPT

72.9

0.52

40.6

Minor 5ss

37.4

-1.4

2.9

50.2

Minor BPS

0.17

1.7

64.36

41.3

Associated Gene:

Gene:

IQSEC3

Ensembl Gene ID:

ENSAPLG00000015024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015655

62533794 - 62568296

34503