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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62625353_62626579_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62625353 - 62626579

Intron Length:

1227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAGAAA

U12 Branch Point Sequence:

CCTGACACAACT

Flanking Amino Acid:

YLLGLLLVTEGGMYIFQLFD

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

-0.1

1.3

56.1

37.3

Major PPT

79.8

0.67

0.7

75.1

26.9

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

44.2

-0.3

2.1

61.95

47.4

Associated Gene:

Gene:

SLC6A12

Ensembl Gene ID:

ENSAPLG00000016026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016716

62617127 - 62640525

23399