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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62628693_62630169_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62628693 - 62630169

Intron Length:

1477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGG

5'SS Class:

major

3'SS Sequence:

TTCTCTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGCCAG

U12 Branch Point Sequence:

CAGGTCTGGAGA

Flanking Amino Acid:

PDISRLADPQVWMDAGTQIL

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

63.1

43.4

Major BPS

45.3

-0.2

1.7

58.2

48.3

Major PPT

84.1

0.77

0.8

76.4

37.7

Minor 5ss

25.2

-2.8

3.2

43.1

Minor BPS

41.3

-0.6

1.7

42.44

39.5

Associated Gene:

Gene:

SLC6A12

Ensembl Gene ID:

ENSAPLG00000016026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016716

62617127 - 62640525

23399