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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62630305_62632925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62630305 - 62632925

Intron Length:

2621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGAACA

5'SS Class:

major

3'SS Sequence:

CTCACGTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

GTTTCCTCACGT

Flanking Amino Acid:

IWKGVKSTGKVVYFTATFPY

Intron Amino Acid Position:

231

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

68.1

Major BPS

72.4

0.56

73.5

32.5

Major PPT

67.6

0.4

0.9

60.1

35.4

Minor 5ss

34.1

-1.8

3.2

41.3

39.1

Minor BPS

52.6

0.16

2.1

76.98

45.2

Associated Gene:

Gene:

SLC6A12

Ensembl Gene ID:

ENSAPLG00000016026

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016716

62617127 - 62640525

23399