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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62673665_62674070_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

62673665 - 62674070

Intron Length:

406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTCACTTTC

5'SS Class:

weak_major

3'SS Sequence:

CAGGTCATCGTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGTCAT

U12 Branch Point Sequence:

TCCGCAGGAATT

Flanking Amino Acid:

LFQHNHPLSMLLNFYYIVV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.21

1.4

66.9

Major BPS

60.9

0.27

1.3

63.1

44.4

Major PPT

58.3

0.19

0.9

51.4

37.6

Minor 5ss

47.4

-0.3

2.6

62.3

36.2

Minor BPS

40.6

-0.6

2.3

57.16

45.9

Associated Gene:

Gene:

SLC6A13

Ensembl Gene ID:

ENSAPLG00000016055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016749

62652980 - 62674098

21119