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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62689716_62691822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62689716 - 62691822

Intron Length:

2107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CAATCTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATACAAT

U12 Branch Point Sequence:

CTGTGCCTAATG

Flanking Amino Acid:

QNCQRPCKDKVDWVQCDGGC

Intron Amino Acid Position:

1905

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

56.4

0.16

1.3

65.1

38.1

Major PPT

76.2

0.59

0.9

69.6

36.1

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

47.4

-0.3

2.2

55.38

46.3

Associated Gene:

Gene:

KDM5A

Ensembl Gene ID:

ENSAPLG00000000585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001099

62689503 - 62736693

47191