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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62692234_62694300_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62692234 - 62694300

Intron Length:

2067

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAACT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CTCTTCTCACCC

Flanking Amino Acid:

SEDRFLHVMEDDSMDEKPLK

Intron Amino Acid Position:

1768

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

79.9

32.9

Major BPS

0.87

0.8

85.6

Major PPT

74.2

0.54

75.2

27.4

Minor 5ss

42.2

-0.9

2.8

58.8

45.4

Minor BPS

49.6

-0

1.9

61.43

44.4

Associated Gene:

Gene:

KDM5A

Ensembl Gene ID:

ENSAPLG00000000585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001099

62689503 - 62736693

47191