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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62694522_62694821_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

62694522 - 62694821

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTGCT

5'SS Class:

major

3'SS Sequence:

TCCAATCTGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTCCTTTTATCC

Flanking Amino Acid:

YSSASKSCSQGSSTPRKQPR

Intron Amino Acid Position:

1694

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

73.4

35.4

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

54.3

0.1

1.2

55.1

Minor 5ss

41.5

-0.9

3.1

59.5

Minor BPS

0.2

1.6

66.74

39.4

Associated Gene:

Gene:

KDM5A

Ensembl Gene ID:

ENSAPLG00000000585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001099

62689503 - 62736693

47191