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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62694982_62698308_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62694982 - 62698308

Intron Length:

3327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

GGGTCTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCATATTT

Flanking Amino Acid:

IRETYGYDIKDNASVKSSSS

Intron Amino Acid Position:

1641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

100

1.24

0.5

100

Major PPT

76.7

0.6

73.1

42.1

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

0.42

1.8

84.33

36.6

Associated Gene:

Gene:

KDM5A

Ensembl Gene ID:

ENSAPLG00000000585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001099

62689503 - 62736693

47191