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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62699777_62700993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62699777 - 62700993

Intron Length:

1217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATGAC

U12 Branch Point Sequence:

TGTCTTTGGACA

Flanking Amino Acid:

LEEARDTAAVVAVFKEREQK

Intron Amino Acid Position:

1409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

69.6

41.1

Major BPS

62.2

0.3

1.2

53.6

41.6

Major PPT

70.7

0.47

1.1

68.1

42.3

Minor 5ss

32.8

-2

3.1

39.9

40.3

Minor BPS

52.7

0.08

1.4

64.81

34.9

Associated Gene:

Gene:

KDM5A

Ensembl Gene ID:

ENSAPLG00000000585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001099

62689503 - 62736693

47191