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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62719150_62720721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62719150 - 62720721

Intron Length:

1572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATATTTTCATGT

Flanking Amino Acid:

DWRCPKCVAEECNKPREAFG

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.1

39.9

Major BPS

100

1.24

0.5

100

Major PPT

78.3

0.64

0.8

77.1

31.7

Minor 5ss

46.4

-0.4

3.1

63.6

48.1

Minor BPS

44.8

-0.3

1.9

62.64

41.8

Associated Gene:

Gene:

KDM5A

Ensembl Gene ID:

ENSAPLG00000000585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001099

62689503 - 62736693

47191