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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62720881_62723879_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62720881 - 62723879

Intron Length:

2999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

CTTCTTTACGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ACTTTTATAACA

Flanking Amino Acid:

QRKGTLSVNFVDLYVCLFCG

Intron Amino Acid Position:

572

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

73.5

37.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

80.1

0.68

0.8

76.6

30.9

Minor 5ss

46.4

-0.4

2.8

64.2

41.3

Minor BPS

60.8

0.34

1.6

69.86

36.5

Associated Gene:

Gene:

KDM5A

Ensembl Gene ID:

ENSAPLG00000000585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001099

62689503 - 62736693

47191