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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62746189_62746785_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

62746189 - 62746785

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAGGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TTGTTTCTATAG

Flanking Amino Acid:

TYFHKEPPHKVTVLQRPDKS

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.9

73.7

36.7

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

81.4

0.71

0.8

76.6

32.2

Minor 5ss

28.8

-2.4

41.1

45.4

Minor BPS

44.1

-0.5

52.41

42.6

Associated Gene:

Gene:

CCDC77

Ensembl Gene ID:

ENSAPLG00000002644

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034000

62741694 - 62791181

49488

ENSAPLT00000002675

62741694 - 62752903

11210