Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_62791257_62792112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

62791257 - 62792112

Intron Length:

856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGGCC

5'SS Class:

major

3'SS Sequence:

CATCTCTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

CATCTCTTGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

62.8

37.8

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

72.6

0.51

68.2

37.2

Minor 5ss

25.5

-2.8

3.4

41.8

Minor BPS

65.3

0.48

1.3

68.31

37.8

Associated Gene:

Gene:

B4GALNT3

Ensembl Gene ID:

ENSAPLG00000002782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002843

62784722 - 62804330

19609