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Intron Name: Anas_platyrhynchos_platyrhynchos_1_62793769_62795226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

62793769 - 62795226

Intron Length:

1458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGGCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTTAG

U12 Branch Point Sequence:

TAGCCCTTCCTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

80.8

31.6

Major BPS

42.8

-0.4

1.6

35.1

43.5

Major PPT

70.9

0.47

0.9

61.5

40.1

Minor 5ss

42.1

-0.9

2.8

56.5

35.6

Minor BPS

-0.8

3.5

56.58

42.3

Associated Gene:

Gene:

B4GALNT3

Ensembl Gene ID:

ENSAPLG00000002782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002843

62784722 - 62804330

19609